BoundaryGeometry Class Reference

#include <BoundaryGeometry.h>

Inheritance diagram for BoundaryGeometry:

Collaboration diagram for BoundaryGeometry:

Public Types
enum	DebugFlags {   debug_isInside = 0x0001 , debug_fastIsInside = 0x0002 , debug_intersectRayBoundary = 0x0004 , debug_intersectLineSegmentBoundary = 0x0008 ,   debug_intersectTinyLineSegmentBoundary = 0x0010 , debug_PartInside = 0x0020 }

Public Member Functions
	BoundaryGeometry ()
virtual	~BoundaryGeometry ()
virtual bool	canReplaceBy (Object *object)
	Test if replacement is allowed. More...
virtual BoundaryGeometry *	clone (const std::string &name)
	Return a clone. More...
virtual void	execute ()
	Execute the command. More...
virtual void	update ()
	Update this object. More...
void	updateElement (ElementBase *element)
void	initialize ()
int	partInside (const Vector_t< double, 3 > &r, const Vector_t< double, 3 > &v, const double dt, Vector_t< double, 3 > &intecoords, int &triId)
	Determine whether a particle with position. More...
Inform &	printInfo (Inform &os) const
void	writeGeomToVtk (std::string fn)
std::string	getFilename () const
Topology	getTopology () const
double	getA ()
double	getB ()
double	getC ()
double	getS ()
double	getLength ()
double	getL1 ()
double	getL2 ()
size_t	getNumBFaces ()
	Return number of boundary faces. More...
Vector_t< double, 3 >	gethr ()
	Return the hr_m. More...
Vector_t< int, 3 >	getnr ()
	Return the nr_m. More...
Vector_t< double, 3 >	getmincoords ()
	Return the mincoords_m. More...
Vector_t< double, 3 >	getmaxcoords ()
	Return the maxcoords_m. More...
bool	getInsidePoint (Vector_t< double, 3 > &pt)
bool	findInsidePoint (void)
int	intersectRayBoundary (const Vector_t< double, 3 > &P, const Vector_t< double, 3 > &v, Vector_t< double, 3 > &I)
int	fastIsInside (const Vector_t< double, 3 > &reference_pt, const Vector_t< double, 3 > &P)
void	enableDebug (enum DebugFlags flags)
void	disableDebug (enum DebugFlags flags)
virtual const std::string	getCategory () const
	Return the object category as a string. More...
virtual bool	shouldTrace () const
	Trace flag. More...
virtual bool	shouldUpdate () const
	Update flag. More...
void	copyAttributes (const Object &)
	Copy attributes from another object. More...
virtual Attribute *	findAttribute (const std::string &name)
	Find an attribute by name. More...
virtual const Attribute *	findAttribute (const std::string &name) const
	Find an attribute by name. More...
virtual Object *	makeTemplate (const std::string &, TokenStream &, Statement &)
	Macro handler function. More...
virtual Object *	makeInstance (const std::string &name, Statement &, const Parser *)
	Macro handler function. More...
virtual void	parse (Statement &)
	Parse the object. More...
virtual void	parseShortcut (Statement &, bool eval=true)
	Parser for single-attribute commands. More...
virtual void	print (std::ostream &) const
	Print the object. More...
virtual void	printValue (std::ostream &) const
virtual void	printHelp (std::ostream &) const
	Print help. More...
virtual void	replace (Object *oldObject, Object *newObject)
	Replace references. More...
bool	isBuiltin () const
	True, if [b]this[/b] is a built-in object. More...
virtual bool	isShared () const
	Shared flag. More...
virtual void	setShared (bool)
	Set/reset shared flag. More...
void	setDirty (bool)
	Set/reset the [b]modified[/b] flag. More...
bool	isDirty () const
	True, if the [b]modified[/b] flag is set. More...
void	setFlag (bool)
	Flag/unflag this object, e. g. to control output of objects for. More...
bool	isFlagged () const
	True, if [b]this[/b] is flagged by setFlag(true). More...
const Object *	getBaseObject () const
	Return the object's base type object. More...
const std::string &	getOpalName () const
	Return object name. More...
Object *	getParent () const
	Return parent pointer. More...
bool	isTreeMember (const Object *subTree) const
	Test for tree membership. More...
void	setOpalName (const std::string &name)
	Set object name. More...
void	setParent (Object *)
	Set parent object. More...
void	clear ()
	Clear the occurrence counter. More...
int	increment ()
	Increment and return the occurrence counter. More...
int	occurrenceCount ()
	Return the occurrence counter. More...
void	registerReference (Invalidator *a)
	Register a reference to this object. More...
void	unregisterReference (Invalidator *a)
	Unegister a reference to this object. More...
void	registerOwnership (const AttributeHandler::OwnerType &itsClass) const
int	addReference () const
	Increment reference count. More...
int	removeReference () const
	Decrement the reference count. More...

Static Public Member Functions
static BoundaryGeometry *	find (const std::string &name)

Public Attributes
std::vector< Attribute >	itsAttr
	The object attributes. More...

Protected Attributes
bool	builtin
	Built-in flag. More...
bool	modified
	Dirty flag. More...
bool	flagged
	Object flag. More...

Private Types
enum	INTERSECTION_TESTS { SEGMENT , RAY , LINE }
enum	{   FGEOM , LENGTH , S , L1 ,   L2 , A , B , C ,   TOPO , ZSHIFT , XYZSCALE , XSCALE ,   YSCALE , ZSCALE , INSIDEPOINT , SIZE }

Private Member Functions
bool	isInside (const Vector_t< double, 3 > &P)
int	intersectTriangleVoxel (const int triangle_id, const int i, const int j, const int k)
int	intersectTinyLineSegmentBoundary (const Vector_t< double, 3 > &, const Vector_t< double, 3 > &, Vector_t< double, 3 > &, int &)
int	intersectLineSegmentBoundary (const Vector_t< double, 3 > &P0, const Vector_t< double, 3 > &P1, Vector_t< double, 3 > &intersection_pt, int &triangle_id)
	BoundaryGeometry (const BoundaryGeometry &)
void	operator= (const BoundaryGeometry &)
	BoundaryGeometry (const std::string &name, BoundaryGeometry *parent)
const Vector_t< double, 3 > &	getPoint (const int triangle_id, const int vertex_id)
int	intersectLineTriangle (const enum INTERSECTION_TESTS kind, const Vector_t< double, 3 > &P0, const Vector_t< double, 3 > &P1, const int triangle_id, Vector_t< double, 3 > &I)
int	mapVoxelIndices2ID (const int i, const int j, const int k)
Vector_t< double, 3 >	mapIndices2Voxel (const int, const int, const int)
Vector_t< double, 3 >	mapPoint2Voxel (const Vector_t< double, 3 > &)
void	computeMeshVoxelization (void)

Private Attributes
std::string	h5FileName_m
std::vector< Vector_t< double, 3 > >	Points_m
std::vector< std::array< unsigned int, 4 > >	Triangles_m
std::vector< Vector_t< double, 3 > >	TriNormals_m
std::vector< double >	TriAreas_m
Vector_t< double, 3 >	minExtent_m
Vector_t< double, 3 >	maxExtent_m
struct {
Vector_t< double, 3 >	minExtent
Vector_t< double, 3 >	maxExtent
Vector_t< double, 3 >	sizeOfVoxel
Vector_t< int, 3 >	nr_m
std::unordered_map< int, std::unordered_set< int > >	ids
}	voxelMesh_m
int	debugFlags_m
bool	haveInsidePoint_m
Vector_t< double, 3 >	insidePoint_m
gsl_rng *	randGen_m
IpplTimings::TimerRef	Tinitialize_m
IpplTimings::TimerRef	TisInside_m
IpplTimings::TimerRef	TfastIsInside_m
IpplTimings::TimerRef	TRayTrace_m
IpplTimings::TimerRef	TPartInside_m
Object *	itsParent
std::string	itsName
std::string	itsHelp
int	occurrence
double	timeStamp
std::set< Invalidator * >	references
bool	sharedFlag
int	refCount

Detailed Description

Definition at line 54 of file BoundaryGeometry.h.

Member Enumeration Documentation

anonymous enum

anonymous enum

private

Enumerator
FGEOM
LENGTH
S
L1
L2
A
B
C
TOPO
ZSHIFT
XYZSCALE
XSCALE
YSCALE
ZSCALE
INSIDEPOINT
SIZE

Definition at line 266 of file BoundaryGeometry.h.

DebugFlags

enum BoundaryGeometry::DebugFlags

Enumerator
debug_isInside
debug_fastIsInside
debug_intersectRayBoundary
debug_intersectLineSegmentBoundary
debug_intersectTinyLineSegmentBoundary
debug_PartInside

Definition at line 176 of file BoundaryGeometry.h.

INTERSECTION_TESTS

enum BoundaryGeometry::INTERSECTION_TESTS

private

Enumerator
SEGMENT
RAY
LINE

Definition at line 255 of file BoundaryGeometry.h.

Constructor & Destructor Documentation

BoundaryGeometry() [1/3]

BoundaryGeometry::BoundaryGeometry

(

)

Definition at line 950 of file BoundaryGeometry.cpp.

References A, B, Object::builtin, C, clone(), OpalData::define(), FGEOM, OpalData::getInstance(), Attributes::getString(), IpplTimings::getTimer(), h5FileName_m, initialize(), INSIDEPOINT, Object::itsAttr, L1, L2, LENGTH, Attributes::makePredefinedString(), Attributes::makeReal(), Attributes::makeRealArray(), Attributes::makeString(), randGen_m, Object::registerOwnership(), S, AttributeHandler::STATEMENT, TfastIsInside_m, Tinitialize_m, TisInside_m, TOPO, TPartInside_m, TRayTrace_m, update(), XSCALE, XYZSCALE, YSCALE, ZSCALE, and ZSHIFT.

Referenced by clone().

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~BoundaryGeometry()

BoundaryGeometry::~BoundaryGeometry ( )

virtual

Definition at line 1037 of file BoundaryGeometry.cpp.

References randGen_m.

BoundaryGeometry() [2/3]

BoundaryGeometry::BoundaryGeometry ( const BoundaryGeometry &  )

private

BoundaryGeometry() [3/3]

BoundaryGeometry::BoundaryGeometry ( const std::string &  name, BoundaryGeometry *  parent  )

private

Definition at line 1021 of file BoundaryGeometry.cpp.

References FGEOM, Attributes::getString(), IpplTimings::getTimer(), h5FileName_m, initialize(), Object::itsAttr, randGen_m, TfastIsInside_m, Tinitialize_m, TisInside_m, TPartInside_m, and TRayTrace_m.

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Member Function Documentation

addReference()

int RCObject::addReference ( ) const

inlineinherited

Increment reference count.

Definition at line 83 of file RCObject.h.

References RCObject::refCount.

Referenced by Pointer< Object >::operator=(), and Pointer< Object >::unique().

canReplaceBy()

bool BoundaryGeometry::canReplaceBy ( Object *  object )

virtual

Test if replacement is allowed.

Reimplemented from Object.

Definition at line 1041 of file BoundaryGeometry.cpp.

clear()

void Object::clear ( )

inherited

Clear the occurrence counter.

Definition at line 339 of file Object.cpp.

References Object::occurrence.

clone()

BoundaryGeometry * BoundaryGeometry::clone ( const std::string &  name )

virtual

Return a clone.

Implements Object.

Definition at line 1046 of file BoundaryGeometry.cpp.

References BoundaryGeometry().

Referenced by BoundaryGeometry(), and TrackRun::setupBoundaryGeometry().

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computeMeshVoxelization()

void BoundaryGeometry::computeMeshVoxelization ( void  )

inlineprivate

Definition at line 1496 of file BoundaryGeometry.cpp.

References Util::combineFilePath(), ippl::Comm, Options::enableVTK, endl(), OpalData::getAuxiliaryOutputDirectory(), OpalData::getInstance(), getPoint(), gmsg, h5FileName_m, INSIDE, intersectTriangleVoxel(), level2(), mapPoint2VoxelIndices, mapVoxelIndices2ID(), ippl::max(), ippl::min(), Triangles_m, and voxelMesh_m.

Referenced by initialize().

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copyAttributes()

void Object::copyAttributes ( const Object &  source )

inherited

Copy attributes from another object.

Definition at line 54 of file Object.cpp.

References Object::itsAttr.

Referenced by SequenceTemplate::makeInstance(), and LineTemplate::makeInstance().

disableDebug()

void BoundaryGeometry::disableDebug ( enum DebugFlags  flags )

inline

Definition at line 189 of file BoundaryGeometry.h.

References debugFlags_m.

enableDebug()

void BoundaryGeometry::enableDebug ( enum DebugFlags  flags )

inline

Definition at line 185 of file BoundaryGeometry.h.

References debugFlags_m.

execute()

void BoundaryGeometry::execute ( )

virtual

Execute the command.

Reimplemented from Object.

Definition at line 1055 of file BoundaryGeometry.cpp.

References IpplTimings::getTimer(), TfastIsInside_m, Tinitialize_m, TisInside_m, TPartInside_m, TRayTrace_m, and update().

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fastIsInside()

int BoundaryGeometry::fastIsInside	(	const Vector_t< double, 3 > &	reference_pt,
		const Vector_t< double, 3 > &	P
	)

Definition at line 1365 of file BoundaryGeometry.cpp.

References Physics::c, debug_fastIsInside, debug_intersectTinyLineSegmentBoundary, debugFlags_m, endl(), gmsg, intersectTinyLineSegmentBoundary(), magnitude(), maxExtent_m, ippl::min(), minExtent_m, IpplTimings::startTimer(), IpplTimings::stopTimer(), TfastIsInside_m, and voxelMesh_m.

Referenced by findInsidePoint(), and isInside().

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find()

BoundaryGeometry * BoundaryGeometry::find ( const std::string &  name )

static

Definition at line 1064 of file BoundaryGeometry.cpp.

References OpalData::find(), and OpalData::getInstance().

Referenced by TrackRun::setupBoundaryGeometry().

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findAttribute() [1/2]

Attribute * Object::findAttribute ( const std::string &  name )

virtualinherited

Find an attribute by name.

Definition at line 64 of file Object.cpp.

References Object::itsAttr.

Referenced by SequenceParser::findNeighbourPositions(), OpalElement::getParticleMatterInteraction(), OpalElement::getTypeName(), OpalElement::getWakeF(), Object::parse(), OpalElement::parse(), Line::parse(), OpalParser::parseAssign(), SequenceParser::parsePosition(), and Object::parseShortcut().

findAttribute() [2/2]

const Attribute * Object::findAttribute ( const std::string &  name ) const

virtualinherited

Find an attribute by name.

Definition at line 72 of file Object.cpp.

References Object::itsAttr.

findInsidePoint()

bool BoundaryGeometry::findInsidePoint

(

void

)

Definition at line 1308 of file BoundaryGeometry.cpp.

References B, endl(), fastIsInside(), gmsg, insidePoint_m, level2(), maxExtent_m, and minExtent_m.

Referenced by initialize().

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getA()

double BoundaryGeometry::getA ( )

inline

Definition at line 97 of file BoundaryGeometry.h.

References A, Attributes::getReal(), and Object::itsAttr.

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getB()

double BoundaryGeometry::getB ( )

inline

Definition at line 101 of file BoundaryGeometry.h.

References B, Attributes::getReal(), and Object::itsAttr.

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getBaseObject()

const Object * Object::getBaseObject ( ) const

inherited

Return the object's base type object.

Definition at line 301 of file Object.cpp.

References Object::itsParent.

getC()

double BoundaryGeometry::getC ( )

inline

Definition at line 105 of file BoundaryGeometry.h.

References C, Attributes::getReal(), and Object::itsAttr.

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getCategory()

const std::string Definition::getCategory ( ) const

virtualinherited

Return the object category as a string.

Implements Object.

Definition at line 29 of file Definition.cpp.

getFilename()

std::string BoundaryGeometry::getFilename ( ) const

inline

Definition at line 84 of file BoundaryGeometry.h.

References FGEOM, Attributes::getString(), and Object::itsAttr.

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gethr()

Vector_t< double, 3 > BoundaryGeometry::gethr ( )

inline

Return the hr_m.

Definition at line 135 of file BoundaryGeometry.h.

References voxelMesh_m.

getInsidePoint()

bool BoundaryGeometry::getInsidePoint ( Vector_t< double, 3 > &  pt )

inline

Definition at line 158 of file BoundaryGeometry.h.

References haveInsidePoint_m, and insidePoint_m.

getL1()

double BoundaryGeometry::getL1 ( )

inline

Definition at line 117 of file BoundaryGeometry.h.

References Attributes::getReal(), Object::itsAttr, and L1.

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getL2()

double BoundaryGeometry::getL2 ( )

inline

Definition at line 121 of file BoundaryGeometry.h.

References Attributes::getReal(), Object::itsAttr, and L2.

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getLength()

double BoundaryGeometry::getLength ( )

inline

Definition at line 113 of file BoundaryGeometry.h.

References Attributes::getReal(), Object::itsAttr, and LENGTH.

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getmaxcoords()

Vector_t< double, 3 > BoundaryGeometry::getmaxcoords ( )

inline

Return the maxcoords_m.

Definition at line 154 of file BoundaryGeometry.h.

References maxExtent_m.

getmincoords()

Vector_t< double, 3 > BoundaryGeometry::getmincoords ( )

inline

Return the mincoords_m.

Definition at line 148 of file BoundaryGeometry.h.

References minExtent_m.

getnr()

Vector_t< int, 3 > BoundaryGeometry::getnr ( )

inline

Return the nr_m.

Definition at line 141 of file BoundaryGeometry.h.

References voxelMesh_m.

getNumBFaces()

size_t BoundaryGeometry::getNumBFaces ( )

inline

Return number of boundary faces.

Definition at line 128 of file BoundaryGeometry.h.

References Triangles_m.

getOpalName()

const std::string & Object::getOpalName ( ) const

inherited

Return object name.

Definition at line 308 of file Object.cpp.

References Object::itsName.

Referenced by OpalOffset::OpalLocalCartesianOffset::clone(), Macro::clone(), OpalData::create(), OpalData::define(), Sequence::findDriftLength(), SequenceParser::findNeighbourPositions(), ValueDefinition::getBool(), ValueDefinition::getBoolComponent(), ValueDefinition::getReal(), ValueDefinition::getRealComponent(), ValueDefinition::getString(), ValueDefinition::getStringComponent(), Object::makeInstance(), SequenceTemplate::makeInstance(), LineTemplate::makeInstance(), Object::parse(), SequenceParser::parseMember(), SequenceParser::parsePosition(), Object::parseShortcut(), Object::print(), OpalElement::print(), Sequence::print(), BoolConstant::print(), RealConstant::print(), RealVariable::print(), RealVector::print(), StringConstant::print(), Beam::print(), OpalFilter::print(), Line::print(), printInfo(), FieldSolverCmd::printInfo(), OpalElement::registerOwnership(), Object::registerOwnership(), Line::replace(), Sequence::replace(), OpalOffset::OpalGlobalCartesianOffset::update(), OpalOffset::OpalGlobalCylindricalOffset::update(), OpalOffset::OpalLocalCartesianOffset::update(), OpalOffset::OpalLocalCylindricalOffset::update(), Beam::update(), update(), and OpalFilter::update().

getParent()

Object * Object::getParent ( ) const

inherited

Return parent pointer.

Definition at line 313 of file Object.cpp.

References Object::itsParent.

Referenced by OpalData::erase(), Object::print(), OpalElement::print(), OpalElement::registerOwnership(), and Object::registerOwnership().

getPoint()

const Vector_t< double, 3 > & BoundaryGeometry::getPoint ( const int  triangle_id, const int  vertex_id  )

inlineprivate

Definition at line 250 of file BoundaryGeometry.h.

References PAssert, Points_m, and Triangles_m.

Referenced by computeMeshVoxelization(), initialize(), intersectLineTriangle(), intersectTinyLineSegmentBoundary(), and intersectTriangleVoxel().

getS()

double BoundaryGeometry::getS ( )

inline

Definition at line 109 of file BoundaryGeometry.h.

References Attributes::getReal(), Object::itsAttr, and S.

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getTopology()

Topology BoundaryGeometry::getTopology ( ) const

inline

Definition at line 88 of file BoundaryGeometry.h.

References BOXCORNER, ELLIPTIC, Attributes::getString(), Object::itsAttr, RECTANGULAR, and TOPO.

Referenced by printInfo().

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increment()

int Object::increment ( )

inherited

Increment and return the occurrence counter.

Definition at line 344 of file Object.cpp.

References Object::occurrence.

Referenced by Line::parse(), and Sequence::storeLine().

initialize()

void BoundaryGeometry::initialize

(

)

Definition at line 1549 of file BoundaryGeometry.cpp.

References A, B, C, ippl::Comm, computeArea(), computeMeshVoxelization(), debugFlags_m, dot(), endl(), findInsidePoint(), getPoint(), Attributes::getReal(), Attributes::getRealArray(), gmsg, h5FileName_m, haveInsidePoint_m, INSIDEPOINT, insidePoint_m, intersectLineTriangle(), isInside(), Object::itsAttr, level2(), ippl::max(), maxExtent_m, minExtent_m, normalVector(), PAssert, PointID, Points_m, randGen_m, SEGMENT, SQR, IpplTimings::startTimer(), IpplTimings::stopTimer(), Tinitialize_m, TisInside_m, Triangles_m, TriAreas_m, TriNormals_m, voxelMesh_m, XSCALE, XYZSCALE, YSCALE, ZSCALE, and ZSHIFT.

Referenced by BoundaryGeometry().

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intersectLineSegmentBoundary()

int BoundaryGeometry::intersectLineSegmentBoundary ( const Vector_t< double, 3 > &  P0, const Vector_t< double, 3 > &  P1, Vector_t< double, 3 > &  intersection_pt, int &  triangle_id  )

private

Definition at line 2180 of file BoundaryGeometry.cpp.

References debug_intersectLineSegmentBoundary, debug_intersectTinyLineSegmentBoundary, debugFlags_m, endl(), gmsg, intersectTinyLineSegmentBoundary(), mapPoint2VoxelIndices, ippl::max(), and ippl::min().

Referenced by intersectRayBoundary().

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intersectLineTriangle()

int BoundaryGeometry::intersectLineTriangle ( const enum INTERSECTION_TESTS  kind, const Vector_t< double, 3 > &  P0, const Vector_t< double, 3 > &  P1, const int  triangle_id, Vector_t< double, 3 > &  I  )

private

Definition at line 1128 of file BoundaryGeometry.cpp.

References cross(), dot(), cmp_ulp::eq_zero(), cmp_ulp::ge_zero(), getPoint(), cmp_ulp::gt(), cmp_ulp::le(), LINE, cmp_ulp::lt(), cmp_ulp::lt_zero(), RAY, and SEGMENT.

Referenced by initialize(), and intersectTinyLineSegmentBoundary().

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intersectRayBoundary()

int BoundaryGeometry::intersectRayBoundary	(	const Vector_t< double, 3 > &	P,
		const Vector_t< double, 3 > &	v,
		Vector_t< double, 3 > &	I
	)

Definition at line 1416 of file BoundaryGeometry.cpp.

References Physics::c, debug_intersectLineSegmentBoundary, debug_intersectRayBoundary, debugFlags_m, endl(), gmsg, intersectLineSegmentBoundary(), IpplTimings::startTimer(), IpplTimings::stopTimer(), TRayTrace_m, and voxelMesh_m.

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intersectTinyLineSegmentBoundary()

int BoundaryGeometry::intersectTinyLineSegmentBoundary ( const Vector_t< double, 3 > &  P, const Vector_t< double, 3 > &  Q, Vector_t< double, 3 > &  intersect_pt, int &  triangle_id  )

private

Definition at line 2049 of file BoundaryGeometry.cpp.

References debug_intersectTinyLineSegmentBoundary, debugFlags_m, endl(), cmp_ulp::eq_zero(), getPoint(), gmsg, Voxel::intersect(), intersectLineTriangle(), LINE, mapIndices2Voxel(), mapPoint2VoxelIndices, mapVoxelIndices2ID(), ippl::max(), ippl::min(), PAssert, Voxel::pts, and voxelMesh_m.

Referenced by fastIsInside(), intersectLineSegmentBoundary(), and partInside().

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intersectTriangleVoxel()

int BoundaryGeometry::intersectTriangleVoxel ( const int  triangle_id, const int  i, const int  j, const int  k  )

private

Definition at line 1075 of file BoundaryGeometry.cpp.

References getPoint(), Voxel::intersect(), and voxelMesh_m.

Referenced by computeMeshVoxelization().

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isBuiltin()

bool Object::isBuiltin ( ) const

inherited

True, if [b]this[/b] is a built-in object.

Definition at line 266 of file Object.cpp.

References Object::builtin.

Referenced by OpalData::define(), and OpalData::getVariableNames().

isDirty()

bool Object::isDirty ( ) const

inherited

True, if the [b]modified[/b] flag is set.

Definition at line 287 of file Object.cpp.

References Object::modified.

isFlagged()

bool Object::isFlagged ( ) const

inherited

True, if [b]this[/b] is flagged by setFlag(true).

Definition at line 297 of file Object.cpp.

References Object::flagged.

isInside()

bool BoundaryGeometry::isInside ( const Vector_t< double, 3 > &  P )

private

Definition at line 1205 of file BoundaryGeometry.cpp.

References fastIsInside(), cmp_ulp::lt(), maxExtent_m, and minExtent_m.

Referenced by initialize().

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isShared()

bool Object::isShared ( ) const

virtualinherited

Shared flag.

Definition at line 271 of file Object.cpp.

References Object::sharedFlag.

Referenced by Sequence::print().

isTreeMember()

bool Object::isTreeMember ( const Object *  subTree ) const

inherited

Test for tree membership.

Definition at line 318 of file Object.cpp.

References Object::itsParent.

Referenced by Selector::handleElement(), and OpalParser::parseAssign().

makeInstance()

Object * Object::makeInstance ( const std::string &  name, Statement &  , const Parser *    )

virtualinherited

Macro handler function.

Reimplemented in SequenceTemplate, MacroCmd, and LineTemplate.

Definition at line 89 of file Object.cpp.

References Object::getOpalName().

Referenced by OpalParser::parseDefine(), and OpalParser::parseMacro().

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makeTemplate()

Object * Object::makeTemplate ( const std::string &  name, TokenStream &  , Statement &    )

virtualinherited

Macro handler function.

Reimplemented in LineTemplate, Sequence, MacroCmd, SequenceTemplate, and Line.

Definition at line 82 of file Object.cpp.

Referenced by OpalParser::parseMacro().

mapIndices2Voxel()

Vector_t< double, 3 > BoundaryGeometry::mapIndices2Voxel ( const int  i, const int  j, const int  k  )

inlineprivate

Definition at line 1480 of file BoundaryGeometry.cpp.

References voxelMesh_m.

Referenced by intersectTinyLineSegmentBoundary(), and mapPoint2Voxel().

mapPoint2Voxel()

Vector_t< double, 3 > BoundaryGeometry::mapPoint2Voxel ( const Vector_t< double, 3 > &  pt )

inlineprivate

Definition at line 1488 of file BoundaryGeometry.cpp.

References mapIndices2Voxel(), and voxelMesh_m.

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mapVoxelIndices2ID()

int BoundaryGeometry::mapVoxelIndices2ID ( const int  i, const int  j, const int  k  )

inlineprivate

Definition at line 1459 of file BoundaryGeometry.cpp.

References voxelMesh_m.

Referenced by computeMeshVoxelization(), and intersectTinyLineSegmentBoundary().

occurrenceCount()

int Object::occurrenceCount ( )

inherited

Return the occurrence counter.

Definition at line 349 of file Object.cpp.

References Object::occurrence.

operator=()

void BoundaryGeometry::operator= ( const BoundaryGeometry &  )

private

parse()

void Object::parse ( Statement &  stat )

virtualinherited

Parse the object.

Reimplemented in Call, Echo, Help, PSystem, System, Title, Value, OpalElement, Sequence, and Line.

Definition at line 95 of file Object.cpp.

References Statement::delimiter(), Object::findAttribute(), Object::getOpalName(), Expressions::parseDelimiter(), Expressions::parseRealConst(), and Expressions::parseString().

Referenced by Sequence::parse(), OpalParser::parseAction(), OpalParser::parseDefine(), and SequenceTemplate::parseTemplate().

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parseShortcut()

void Object::parseShortcut ( Statement &  stat, bool  eval = true  )

virtualinherited

Parser for single-attribute commands.

Definition at line 127 of file Object.cpp.

References Statement::delimiter(), Object::findAttribute(), Object::getOpalName(), Statement::mark(), and Statement::word().

Referenced by Call::parse(), Echo::parse(), Help::parse(), PSystem::parse(), System::parse(), Title::parse(), and Value::parse().

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partInside()

int BoundaryGeometry::partInside	(	const Vector_t< double, 3 > &	r,
		const Vector_t< double, 3 > &	v,
		const double	dt,
		Vector_t< double, 3 > &	intersect_pt,
		int &	triangle_id
	)

Determine whether a particle with position.

Parameters

r,momenta

param v , and time step

Parameters

dt	will hit the boundary.

return value: -1 no collison with boundary 0 particle will collide with boundary in next time step

Definition at line 2240 of file BoundaryGeometry.cpp.

References Physics::c, debug_intersectTinyLineSegmentBoundary, debug_PartInside, debugFlags_m, dot(), endl(), gmsg, intersectTinyLineSegmentBoundary(), IpplTimings::startTimer(), IpplTimings::stopTimer(), and TPartInside_m.

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print()

void Object::print ( std::ostream &  msg ) const

virtualinherited

Print the object.

Reimplemented in OpalElement, OpalMarker, OpalMultipole, OpalOffset::OpalGlobalCartesianOffset, OpalOffset::OpalGlobalCylindricalOffset, OpalOffset::OpalLocalCartesianOffset, OpalOffset::OpalLocalCylindricalOffset, OpalRingDefinition, Sequence, BoolConstant, RealConstant, RealVariable, RealVector, StringConstant, DumpEMFields, DumpFields, OpalMultipoleT, Beam, OpalFilter, and Line.

Definition at line 159 of file Object.cpp.

References endl(), Object::getOpalName(), Object::getParent(), and Object::itsAttr.

Referenced by Object::printValue().

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printHelp()

void Object::printHelp ( std::ostream &  ) const

virtualinherited

Print help.

Definition at line 199 of file Object.cpp.

References endl(), gmsg, Object::itsAttr, Object::itsHelp, and ippl::max().

Referenced by Help::execute().

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printInfo()

Inform & BoundaryGeometry::printInfo

(

Inform &

os

)

const

Definition at line 2324 of file BoundaryGeometry.cpp.

References A, B, BOXCORNER, C, endl(), FGEOM, Object::getOpalName(), Attributes::getReal(), Attributes::getString(), getTopology(), Object::itsAttr, L1, L2, LENGTH, S, TOPO, XSCALE, XYZSCALE, YSCALE, and ZSCALE.

Referenced by operator<<().

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printValue()

void Object::printValue ( std::ostream &  os ) const

inlinevirtualinherited

Reimplemented in BoolConstant, RealConstant, RealVariable, RealVector, and StringConstant.

Definition at line 280 of file Object.h.

References Object::print().

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registerOwnership()

void Object::registerOwnership ( const AttributeHandler::OwnerType &  itsClass ) const

inherited

Definition at line 189 of file Object.cpp.

References AttributeHandler::addAttributeOwner(), end(), Object::getOpalName(), Object::getParent(), and Object::itsAttr.

Referenced by Beam::Beam(), BoolConstant::BoolConstant(), BoundaryGeometry(), Call::Call(), Distribution::Distribution(), DumpEMFields::DumpEMFields(), DumpFields::DumpFields(), Echo::Echo(), Help::Help(), Line::Line(), OpalFilter::OpalFilter(), Option::Option(), PSystem::PSystem(), RealConstant::RealConstant(), RealVariable::RealVariable(), RealVector::RealVector(), Select::Select(), Sequence::Sequence(), StringConstant::StringConstant(), System::System(), Title::Title(), TrackCmd::TrackCmd(), TrackRun::TrackRun(), and Value::Value().

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registerReference()

void Object::registerReference ( Invalidator *  a )

inherited

Register a reference to this object.

Definition at line 180 of file Object.cpp.

References Object::references.

removeReference()

int RCObject::removeReference ( ) const

inlineinherited

Decrement the reference count.

Definition at line 88 of file RCObject.h.

References RCObject::refCount.

replace()

void Object::replace ( Object *  oldObject, Object *  newObject  )

virtualinherited

Replace references.

Reimplemented in Line, and Sequence.

Definition at line 256 of file Object.cpp.

setDirty()

void Object::setDirty ( bool  dirty )

inherited

Set/reset the [b]modified[/b] flag.

Definition at line 281 of file Object.cpp.

References Object::modified.

Referenced by OpalData::define(), OpalData::makeDirty(), and RealVariable::RealVariable().

setFlag()

void Object::setFlag ( bool  flag )

inherited

Flag/unflag this object, e. g. to control output of objects for.

Definition at line 292 of file Object.cpp.

References Object::flagged.

setOpalName()

void Object::setOpalName ( const std::string &  name )

inherited

Set object name.

Definition at line 329 of file Object.cpp.

References Object::itsName.

Referenced by Beam::update(), update(), and OpalFilter::update().

setParent()

void Object::setParent ( Object *  parent )

inherited

Set parent object.

Definition at line 334 of file Object.cpp.

References Object::itsParent.

Referenced by OpalData::erase().

setShared()

void Object::setShared ( bool  flag )

virtualinherited

Set/reset shared flag.

Reimplemented in Element.

Definition at line 276 of file Object.cpp.

References Object::sharedFlag.

Referenced by OpalParser::parseDefine(), and Element::setShared().

shouldTrace()

bool Definition::shouldTrace ( ) const

virtualinherited

Trace flag.

Implements Object.

Definition at line 34 of file Definition.cpp.

shouldUpdate()

bool Definition::shouldUpdate ( ) const

virtualinherited

Update flag.

Implements Object.

Definition at line 39 of file Definition.cpp.

unregisterReference()

void Object::unregisterReference ( Invalidator *  a )

inherited

Unegister a reference to this object.

Definition at line 185 of file Object.cpp.

References Object::references.

update()

void BoundaryGeometry::update ( )

virtual

Update this object.

Reimplemented from Object.

Definition at line 1050 of file BoundaryGeometry.cpp.

References Object::getOpalName(), and Object::setOpalName().

Referenced by BoundaryGeometry(), and execute().

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updateElement()

void BoundaryGeometry::updateElement

(

ElementBase *

element

)

Definition at line 1072 of file BoundaryGeometry.cpp.

writeGeomToVtk()

void BoundaryGeometry::writeGeomToVtk

(

std::string

fn

)

Definition at line 2292 of file BoundaryGeometry.cpp.

References endl(), PAssert, PointID, Points_m, and Triangles_m.

Referenced by DataSink::writeGeomToVtk().

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Member Data Documentation

builtin

bool Object::builtin

protectedinherited

Built-in flag.

Definition at line 233 of file Object.h.

Referenced by Beam::Beam(), BoundaryGeometry(), Object::isBuiltin(), Object::Object(), OpalFilter::OpalFilter(), OpalMarker::OpalMarker(), RealConstant::RealConstant(), StringConstant::StringConstant(), and Table::~Table().

debugFlags_m

int BoundaryGeometry::debugFlags_m

private

Definition at line 231 of file BoundaryGeometry.h.

Referenced by disableDebug(), enableDebug(), fastIsInside(), initialize(), intersectLineSegmentBoundary(), intersectRayBoundary(), intersectTinyLineSegmentBoundary(), and partInside().

flagged

bool Object::flagged

protectedinherited

Object flag.

Definition at line 242 of file Object.h.

Referenced by Object::isFlagged(), Object::Object(), and Object::setFlag().

h5FileName_m

std::string BoundaryGeometry::h5FileName_m

private

Definition at line 206 of file BoundaryGeometry.h.

Referenced by BoundaryGeometry(), computeMeshVoxelization(), and initialize().

haveInsidePoint_m

bool BoundaryGeometry::haveInsidePoint_m

private

Definition at line 233 of file BoundaryGeometry.h.

Referenced by getInsidePoint(), and initialize().

insidePoint_m

Vector_t<double, 3> BoundaryGeometry::insidePoint_m

private

Definition at line 234 of file BoundaryGeometry.h.

Referenced by findInsidePoint(), getInsidePoint(), and initialize().

itsAttr

std::vector<Attribute> Object::itsAttr

inherited

The object attributes.

Definition at line 216 of file Object.h.

Referenced by Beam::Beam(), BoolConstant::BoolConstant(), BoundaryGeometry(), DumpEMFields::buildGrid(), DumpFields::buildGrid(), Call::Call(), FieldSolverCmd::constructBCHandler(), Object::copyAttributes(), Distribution::Distribution(), DumpEMFields::DumpEMFields(), DumpFields::DumpFields(), Echo::Echo(), Call::execute(), Echo::execute(), Help::execute(), Option::execute(), PSystem::execute(), Select::execute(), System::execute(), Title::execute(), Value::execute(), Beam::execute(), TrackCmd::execute(), TrackRun::execute(), FieldSolverCmd::FieldSolverCmd(), Object::findAttribute(), getA(), OpalElement::getApert(), getB(), BoolConstant::getBool(), FieldSolverCmd::getBoxIncr(), getC(), Beam::getCharge(), Beam::getCurrent(), FieldSolverCmd::getDomDec(), TrackCmd::getDT(), TrackCmd::getDTAU(), TrackCmd::getDTSCINIT(), getFilename(), Beam::getFrequency(), getL1(), getL2(), getLength(), OpalElement::getLength(), Line::getLength(), Sequence::getLength(), Beam::getMass(), TrackCmd::getMaxSteps(), Beam::getNumberOfParticles(), FieldSolverCmd::getNX(), FieldSolverCmd::getNY(), FieldSolverCmd::getNZ(), Beam::getParticleName(), RealConstant::getReal(), RealVariable::getReal(), RealVector::getRealComponent(), Sequence::getReference(), getS(), TrackCmd::getStepsPerTurn(), StringConstant::getString(), TrackCmd::getT0(), TrackCmd::getTimeIntegrator(), getTopology(), FieldSolverCmd::getType(), TrackCmd::getZStart(), TrackCmd::getZStop(), Help::Help(), initialize(), OpalFilter::initOpalFilter(), Line::Line(), OpalCavity::OpalCavity(), OpalDrift::OpalDrift(), OpalElement::OpalElement(), OpalFilter::OpalFilter(), OpalOffset::OpalGlobalCartesianOffset::OpalGlobalCartesianOffset(), OpalOffset::OpalGlobalCylindricalOffset::OpalGlobalCylindricalOffset(), OpalOffset::OpalLocalCartesianOffset::OpalLocalCartesianOffset(), OpalOffset::OpalLocalCylindricalOffset::OpalLocalCylindricalOffset(), OpalMultipole::OpalMultipole(), OpalMultipoleT::OpalMultipoleT(), OpalProbe::OpalProbe(), OpalRingDefinition::OpalRingDefinition(), OpalSolenoid::OpalSolenoid(), OpalTravelingWave::OpalTravelingWave(), OpalVacuum::OpalVacuum(), OpalVerticalFFAMagnet::OpalVerticalFFAMagnet(), Option::Option(), Sequence::parse(), Line::parse(), DumpEMFields::parseCoordinateSystem(), TrackRun::print(), Object::print(), Sequence::print(), BoolConstant::print(), RealConstant::print(), RealVariable::print(), RealVector::print(), StringConstant::print(), DumpEMFields::print(), DumpFields::print(), Beam::print(), OpalFilter::print(), Object::printHelp(), printInfo(), FieldSolverCmd::printInfo(), BoolConstant::printValue(), RealConstant::printValue(), RealVariable::printValue(), RealVector::printValue(), StringConstant::printValue(), PSystem::PSystem(), RealConstant::RealConstant(), RealVariable::RealVariable(), RealVector::RealVector(), OpalElement::registerOwnership(), Object::registerOwnership(), Select::Select(), Select::select(), Sequence::Sequence(), Distribution::setDistParametersFlatTop(), Distribution::setDistParametersMultiVariateGauss(), Distribution::setDistType(), FieldSolverCmd::setNX(), FieldSolverCmd::setNY(), FieldSolverCmd::setNZ(), TrackRun::setRunMethod(), Distribution::setSigmaP_m(), Distribution::setSigmaR_m(), TrackRun::setupBoundaryGeometry(), StringConstant::StringConstant(), System::System(), Title::Title(), TrackCmd::TrackCmd(), TrackRun::TrackRun(), OpalCavity::update(), OpalDrift::update(), OpalElement::update(), OpalMonitor::update(), OpalMultipole::update(), OpalMultipoleT::update(), OpalOffset::OpalGlobalCartesianOffset::update(), OpalOffset::OpalGlobalCylindricalOffset::update(), OpalOffset::OpalLocalCartesianOffset::update(), OpalOffset::OpalLocalCylindricalOffset::update(), OpalProbe::update(), OpalRingDefinition::update(), OpalSolenoid::update(), OpalTravelingWave::update(), OpalVacuum::update(), OpalVerticalFFAMagnet::update(), Beam::update(), FieldSolverCmd::update(), Option::update(), OpalElement::updateUnknown(), ValueDefinition::value(), and Value::Value().

itsHelp

std::string Object::itsHelp

privateinherited

Definition at line 258 of file Object.h.

Referenced by Object::printHelp().

itsName

std::string Object::itsName

privateinherited

Definition at line 255 of file Object.h.

Referenced by Object::getOpalName(), and Object::setOpalName().

itsParent

Object* Object::itsParent

privateinherited

Definition at line 252 of file Object.h.

Referenced by Object::getBaseObject(), Object::getParent(), Object::isTreeMember(), and Object::setParent().

maxExtent_m

Vector_t<double, 3> BoundaryGeometry::maxExtent_m

private

Definition at line 217 of file BoundaryGeometry.h.

Referenced by fastIsInside(), findInsidePoint(), getmaxcoords(), initialize(), and isInside().

minExtent_m

Vector_t<double, 3> BoundaryGeometry::minExtent_m

private

Definition at line 216 of file BoundaryGeometry.h.

Referenced by fastIsInside(), findInsidePoint(), getmincoords(), initialize(), and isInside().

modified

bool Object::modified

protectedinherited

Dirty flag.

Definition at line 238 of file Object.h.

Referenced by Object::isDirty(), Object::Object(), and Object::setDirty().

occurrence

int Object::occurrence

privateinherited

Definition at line 261 of file Object.h.

Referenced by Object::clear(), Object::increment(), and Object::occurrenceCount().

Points_m

std::vector<Vector_t<double, 3> > BoundaryGeometry::Points_m

private

Definition at line 208 of file BoundaryGeometry.h.

Referenced by getPoint(), initialize(), and writeGeomToVtk().

randGen_m

gsl_rng* BoundaryGeometry::randGen_m

private

Definition at line 236 of file BoundaryGeometry.h.

Referenced by BoundaryGeometry(), initialize(), and ~BoundaryGeometry().

refCount

int RCObject::refCount

mutableprivateinherited

Definition at line 76 of file RCObject.h.

Referenced by RCObject::addReference(), RCObject::isShared(), and RCObject::removeReference().

references

std::set<Invalidator *> Object::references

privateinherited

Definition at line 268 of file Object.h.

Referenced by Object::registerReference(), Object::unregisterReference(), and Object::~Object().

sharedFlag

bool Object::sharedFlag

privateinherited

Definition at line 271 of file Object.h.

Referenced by Object::isShared(), and Object::setShared().

TfastIsInside_m

IpplTimings::TimerRef BoundaryGeometry::TfastIsInside_m

private

Definition at line 240 of file BoundaryGeometry.h.

Referenced by BoundaryGeometry(), execute(), and fastIsInside().

timeStamp

double Object::timeStamp

privateinherited

Definition at line 264 of file Object.h.

Tinitialize_m

IpplTimings::TimerRef BoundaryGeometry::Tinitialize_m

private

Definition at line 238 of file BoundaryGeometry.h.

Referenced by BoundaryGeometry(), execute(), and initialize().

TisInside_m

IpplTimings::TimerRef BoundaryGeometry::TisInside_m

private

Definition at line 239 of file BoundaryGeometry.h.

Referenced by BoundaryGeometry(), execute(), and initialize().

TPartInside_m

IpplTimings::TimerRef BoundaryGeometry::TPartInside_m

private

Definition at line 242 of file BoundaryGeometry.h.

Referenced by BoundaryGeometry(), execute(), and partInside().

TRayTrace_m

IpplTimings::TimerRef BoundaryGeometry::TRayTrace_m

private

Definition at line 241 of file BoundaryGeometry.h.

Referenced by BoundaryGeometry(), execute(), and intersectRayBoundary().

Triangles_m

std::vector<std::array<unsigned int, 4> > BoundaryGeometry::Triangles_m

private

Definition at line 210 of file BoundaryGeometry.h.

Referenced by computeMeshVoxelization(), getNumBFaces(), getPoint(), initialize(), and writeGeomToVtk().

TriAreas_m

std::vector<double> BoundaryGeometry::TriAreas_m

private

Definition at line 214 of file BoundaryGeometry.h.

Referenced by initialize().

TriNormals_m

std::vector<Vector_t<double, 3> > BoundaryGeometry::TriNormals_m

private

Definition at line 213 of file BoundaryGeometry.h.

Referenced by initialize().

struct { ... } BoundaryGeometry::voxelMesh_m

Referenced by computeMeshVoxelization(), fastIsInside(), gethr(), getnr(), initialize(), intersectRayBoundary(), intersectTinyLineSegmentBoundary(), intersectTriangleVoxel(), mapIndices2Voxel(), mapPoint2Voxel(), and mapVoxelIndices2ID().

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The documentation for this class was generated from the following files:

• BoundaryGeometry.h
• BoundaryGeometry.cpp